Bérénice Batut
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  • ELIXIR All Hands Meeting 2026

    At the ELIXIR All Hands Meeting (Lyon, June 8–10), I presented the MiCoReCa project and FAIRyMAGs results, contributed to the Tools Platform mini-symposium, and showcased the Microbiology Galaxy Lab poster.

    1 min read   ·   June 11, 2026

    2026   ·   elixir   ·   internal-posts

  • ELIXIR Biodiversity, Food Security and Pathogens Workshop

    At the ELIXIR Biodiversity, Food Security and Pathogens workshop (April 20–21, 2026), I presented updates on FAIRyMAGs, a FAIR-compliant Galaxy pipeline for MAG analysis, and contributed to the BFSP 2027–2028 work plan.

    1 min read   ·   April 22, 2026

    2026   ·   elixir   ·   internal-posts

  • Interview about my BioHackathon Europe journey

    At BioHackathon Europe 2024 in Berlin, I shared my BioHackathon journey in an interview with Deborah, reflecting on how these events have shaped my work.

    1 min read   ·   March 26, 2026

    2026   ·   elixir   ·   internal-posts

  • Ten Common Misconceptions About Galaxy (And Why They’re Wrong!) | Galaxy Hub

    We are thrilled to announce that 'Ten Common Misconceptions About Galaxy (And Why They Are Wrong!)' has just been published in PLOS Computational Biology! This paper is the result of passionate discussions, collaborative debates, and a shared commitment to clarifying what Galaxy truly is—and what it can do. Whether you are a longtime Galaxy user or new to the platform, this paper will challenge assumptions and highlight Galaxy's versatility, scalability, and impact across disciplines.

    5 min read   ·   February 18, 2026   ·   Galaxy

    2026   ·   galaxy   ·   external-posts

  • Exploring Microbial Dark Matter: Outcomes of the FAIRyMAGs Hackathon 2025 | Galaxy Hub

    Exploring Microbial Dark Matter: Outcomes of the FAIRyMAGs Hackathon 2025

    5 min read   ·   October 20, 2025   ·   Galaxy

    2025   ·   galaxy   ·   external-posts

  • How Galaxy is Unlocking the Secrets of Microbes: From Health to Ecosystems | Galaxy Hub

    Microbes—bacteria, fungi, viruses, and archaea—are invisible to the naked eye, but their impact is everywhere. They shape our health, drive Earth's ecosystems, and even influence the climate. Thanks to Galaxy and the Microbiology Galaxy Lab, researchers worldwide are unlocking the secrets of these microscopic powerhouses, leading to breakthroughs in medicine, ecology, and sustainability.

    5 min read   ·   September 16, 2025   ·   Galaxy

    2025   ·   galaxy   ·   external-posts

  • Galaxy at JOBIM | Galaxy Hub

    The JOBIM conference, the annual event of the French bioinformatics and biostatistic community, brought together researchers, educators, and innovators in bioinformatics to discuss cutting-edge tools, workflows, and collaborative efforts. Among the highlights of this year's event was the significant presence of Galaxy. This blog post explores the key contributions, presentations, and innovations centered around Galaxy at JOBIM 2025.

    6 min read   ·   July 20, 2025   ·   Galaxy

    2025   ·   galaxy   ·   external-posts

  • Enhancing Scientific Training: The Galaxy Training Network's Role in the ELIXIR Training Life-Cycle

    In the rapidly evolving landscape of data science, continuous learning and skill development are crucial. The Galaxy Training Network (GTN) plays a pivotal role in this educational ecosystem, particularly within the ELIXIR Training Life-Cycle. This blog post explores how the GTN contributes to each phase of the life-cycle and aligns with the SPLASH recommendations, ensuring high-quality training for researchers worldwide.

    4 min read   ·   June 30, 2025   ·   Galaxy

    2025   ·   galaxy   ·   external-posts

  • New Paper "Guidance framework to apply best practices in ecological data analysis: lessons learned from building Galaxy-Ecology" | Galaxy Hub

    We are excited to share our recent publication in GigaScience. This paper presents a practical framework aimed at improving transparency, reproducibility, and efficiency in ecological research by leveraging the Galaxy-Ecology platform.​

    3 min read   ·   March 20, 2025   ·   Galaxy

    2025   ·   galaxy   ·   external-posts

  • ELIXIR Funding for FAIRyMAGs: Optimising Metagenomics Assembled Genomes building | Galaxy Hub

    FAIRyMAGs: Optimising Metagenomics Assembled Genomes building: workflow finalisation, training material development, real data evaluation and resource allocation tool creation

    3 min read   ·   January 08, 2025   ·   Galaxy

    2025   ·   galaxy   ·   external-posts

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